Detailed information of matrix profile MA0264.1

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Profile summary
Name: ceh-22
Matrix ID: MA0264.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 16998473
Uniprot ID: P41936  
Source:
Comment: NK-2 class; ortholog to Drosophila tinman and vertebrate Nkx2-5

Sequence logo

Frequency matrix

         
A [ 12 3 4 1 83 99 0 5 9 0 19 ]
C [ 15 20 0 63 0 0 0 0 0 19 31 ]
G [ 20 29 0 27 16 0 97 1 89 71 15 ]
T [ 51 46 95 7 0 0 1 93 0 8 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0264.1 MA0264 1 ceh-22 Caenorhabditis elegans
NK-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: