Detailed information of matrix profile MA0513.1

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Profile summary
Name: SMAD2::SMAD3::SMAD4
Matrix ID: MA0513.1
Class: SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors
Family: SMAD factors::SMAD factors::SMAD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 9741623
Uniprot ID: P84022   Q13485   Q15796  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 540 152 0 97 0 283 23 899 0 718 0 594 133 ]
C [ 35 47 133 18 3 280 539 0 0 103 877 34 168 ]
G [ 214 583 736 19 896 125 231 0 899 45 8 75 432 ]
T [ 110 117 30 765 0 211 106 0 0 33 14 196 166 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0513.1 MA0513 1 SMAD2::SMAD3::SMAD4 Homo sapiens
SMAD factors::SMAD factors::SMAD factors SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors::SMAD/NF-1 DNA-binding domain factors
     

log(P-value) = -460

TFFM details

TFFM ID: TFFM0201.1

ChIP-seq Centrality
log(P-value): -969.093

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0201.1

ChIP-seq Centrality
log(P-value): -964.027

TFFM detailed summary logos

Description: -

Alias: -

Symbol: -

Consensus:

Included Models:

GC Content: