Detailed information of matrix profile MA0563.1

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Profile summary
Name: SEP3
Matrix ID: MA0563.1
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 19033361
Uniprot ID: O22456  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 29 3 114 117 150 126 105 73 51 15 60 ]
C [ 114 138 22 24 0 5 5 0 1 5 29 ]
G [ 7 0 3 0 0 0 28 0 97 111 37 ]
T [ 0 9 11 9 0 19 12 77 1 19 24 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0563.1 MA0563 1 SEP3 Arabidopsis thaliana
MADS box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0582.1

ChIP-seq Centrality
log(P-value): -419.438

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0582.1

ChIP-seq Centrality
log(P-value): -429.561

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: