Detailed information of matrix profile MA0577.1

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Profile summary
Name: SPL3
Matrix ID: MA0577.1
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 16095614
Uniprot ID: P93015  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 10 15 14 13 13 10 0 0 34 0 1 5 10 14 16 9 ]
C [ 3 0 2 4 2 7 0 0 0 34 2 1 13 6 8 9 ]
G [ 12 7 8 9 6 7 34 0 0 0 29 15 1 0 2 3 ]
T [ 9 12 10 8 13 10 0 34 0 0 2 13 10 14 8 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0577.1 MA0577 1 SPL3 Arabidopsis thaliana
SBP-type zinc finger
MA0577.2 MA0577 2 SPL3 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: