Detailed information of matrix profile MA0577.2

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Profile summary
Name: SPL3
Matrix ID: MA0577.2
Class: SBP-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 16554053
Uniprot ID: P93015  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 26 0 0 0 0 158 0 68 ]
C [ 6 158 158 0 0 0 158 29 ]
G [ 20 0 0 158 0 0 0 33 ]
T [ 106 0 0 0 158 0 0 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0577.1 MA0577 1 SPL3 Arabidopsis thaliana
SBP-type zinc finger
MA0577.2 MA0577 2 SPL3 Arabidopsis thaliana
SBP-type zinc finger
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: