Detailed information of matrix profile MA0604.1

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Profile summary
Name: Atf1
Matrix ID: MA0604.1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: PBM
Validation: 1655749
Uniprot ID: P81269  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 100 712 0 0 0 175 960 65 ]
C [ 163 0 993 0 0 803 0 387 ]
G [ 138 198 0 1000 0 22 16 86 ]
T [ 600 90 7 0 1000 0 24 462 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0604.1 MA0604 1 Atf1 Mus musculus
CREB-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0002.1

ChIP-seq Centrality
log(P-value): -4561.31

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0002.1

ChIP-seq Centrality
log(P-value): -5149.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: