Detailed information of matrix profile MA0668.1

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Profile summary
Name: NEUROD2
Matrix ID: MA0668.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22445365
Uniprot ID: Q15784  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 685 548 112 1587 4 1587 52 0 0 95 ]
C [ 101 705 1587 0 38 0 308 95 240 769 ]
G [ 592 373 0 328 120 156 0 1587 875 119 ]
T [ 209 0 0 0 1587 0 1587 0 527 604 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0668.1 MA0668 1 NEUROD2 Homo sapiens
Tal-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0533.1

ChIP-seq Centrality
log(P-value): -39463.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0533.1

ChIP-seq Centrality
log(P-value): -40051.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: