Detailed information of matrix profile MA0693.1

Profile summary

Name: Vdr
Matrix ID: MA0693.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 8065900
Uniprot ID: P48281  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 149 1671 28965 29193 5 3 464 13845 19613 210 884 30107 29506 11 1 173 ]
C [ 4040 73 1241 2512 28372 12607 22959 2619 1638 3649 62 919 3866 28323 12584 23911 ]
G [ 137 45781 391 7 2 14 2186 12672 8775 130 46948 455 13 5 11 1471 ]
T [ 37729 7 263 2 6 20690 5903 6013 3643 35680 43 267 5 8 20648 5712 ]

Binding sites information

No Binding sites available for this model.

External links