Detailed information of matrix profile MA0741.1

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Profile summary
Name: KLF16
Matrix ID: MA0741.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 16266294
Uniprot ID: Q9BXK1  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 370 40 97 0 0 403 19 0 45 116 240 ]
C [ 23 19 3 8 0 1612 17 32 6 77 1612 ]
G [ 1612 1175 1612 1612 1612 173 1612 461 1612 1612 535 ]
T [ 32 437 16 2 8 497 66 1150 62 901 666 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0741.1 MA0741 1 KLF16 Homo sapiens
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0516.1

ChIP-seq Centrality
log(P-value): -3110.79

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0516.1

ChIP-seq Centrality
log(P-value): -3293.68

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: