Detailed information of matrix profile MA0747.1

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Profile summary
Name: SP8
Matrix ID: MA0747.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23019068
Uniprot ID: Q8IXZ3  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 82 39 3 15 0 2 39 5 2 13 4 10 ]
C [ 1 21 6 4 3 6 167 1 1 0 0 78 ]
G [ 52 167 77 167 167 167 37 167 33 167 113 27 ]
T [ 31 13 90 0 2 5 25 7 133 25 54 52 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0747.1 MA0747 1 SP8 Homo sapiens
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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