Detailed information of matrix profile MA0844.1

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Profile summary
Name: XBP1
Matrix ID: MA0844.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15598891
Uniprot ID: P17861  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1250 6389 92 35 9107 10 10 118 442 247 2321 3999 1780 2467 ]
C [ 1217 3157 173 47 8 11353 2 276 222 59 9168 2669 2413 801 ]
G [ 6313 2273 48 7264 16 0 7356 17 7169 3809 367 1191 1017 558 ]
T [ 989 230 8004 380 0 52 9 7840 167 3699 974 1104 3270 4396 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0844.1 MA0844 1 XBP1 Homo sapiens
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0214.1

ChIP-seq Centrality
log(P-value): -2134.98

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0214.1

ChIP-seq Centrality
log(P-value): -2944.27

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: