Detailed information of matrix profile MA0858.1

Profile summary

Name: Rarb(var.2)
Matrix ID: MA0858.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 15019979
Uniprot ID: P22605  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

A [ 1 4 674 26 0 1 4 158 281 64 204 0 1 694 22 0 0 ]
C [ 2 0 4 663 682 37 218 41 116 140 15 4 2 0 663 713 39 ]
G [ 0 765 3 2 1 0 4 34 239 252 210 0 686 2 1 1 3 ]
T [ 693 0 0 0 1 639 398 438 38 249 293 728 1 0 2 0 610 ]

Binding sites information

No Binding sites available for this model.

External links