Detailed information of matrix profile MA0893.1

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Profile summary
Name: GSX2
Matrix ID: MA0893.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q9BZM3  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2097 1233 796 9508 9508 712 1446 5377 1835 2121 ]
C [ 1535 2235 155 130 0 640 504 520 2235 2083 ]
G [ 2288 1642 298 811 344 458 3332 4131 3895 2469 ]
T [ 3588 4398 9508 840 663 9508 6175 1147 1543 2836 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0893.1 MA0893 1 GSX2 Homo sapiens
HOX-related factors Homeo domain factors
MA0893.2 MA0893 2 GSX2 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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