Detailed information of matrix profile MA0907.1

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Profile summary
Name: HOXC13
Matrix ID: MA0907.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P31276  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 362 205 1 8 165 1257 4 132 1257 13 309 ]
C [ 147 89 0 2 2 5 1257 10 5 58 495 ]
G [ 358 173 0 4 1 0 4 1257 21 1257 288 ]
T [ 389 1257 1257 1257 1257 0 251 26 4 44 165 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0907.1 MA0907 1 HOXC13 Homo sapiens
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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