Detailed information of matrix profile MA0981.1

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Profile summary
Name: DOF1.8
Matrix ID: MA0981.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 10758479
Uniprot ID: Q84JQ8  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 234 273 359 65 83 102 77 350 233 234 ]
C [ 269 270 231 846 27 3 38 135 250 256 ]
G [ 209 189 241 23 233 64 72 100 197 259 ]
T [ 288 268 170 65 658 831 812 415 321 251 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0981.1 MA0981 1 DOF1.8 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0239.1

ChIP-seq Centrality
log(P-value): -6921.98

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0239.1

ChIP-seq Centrality
log(P-value): -6467.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: