Detailed information of matrix profile MA1005.1

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Profile summary
Name: ERF3
Matrix ID: MA1005.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 9756931
Uniprot ID: O80339  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 116 16 114 0 0 0 0 80 ]
C [ 279 0 186 985 14 114 985 80 ]
G [ 23 904 643 0 985 885 0 760 ]
T [ 581 79 57 14 0 0 14 80 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1005.1 MA1005 1 ERF3 Arabidopsis thaliana
AP2/ERF domain
MA1005.2 MA1005 2 ERF3 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0333.1

ChIP-seq Centrality
log(P-value): -1520.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0333.1

ChIP-seq Centrality
log(P-value): -1514.71

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: