Detailed information of matrix profile MA1018.1

  1. Home
  2. Matrix > MA1018.1

Profile summary
Name: GATA9
Matrix ID: MA1018.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 12504119
Uniprot ID: O82632  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 305 165 858 0 1000 0 0 0 453 161 318 ]
C [ 199 452 23 0 0 0 1000 74 51 161 227 ]
G [ 199 89 97 1000 0 0 0 0 291 516 227 ]
T [ 296 294 23 0 0 1000 0 925 204 161 227 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1018.1 MA1018 1 GATA9 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: