Detailed information of matrix profile MA1054.1

  1. Home
  2. Matrix > MA1054.1

Profile summary
Name: ARALYDRAFT_897773
Matrix ID: MA1054.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis lyrata subsp. lyrata
Data Type: PBM
Validation: 21241251
Uniprot ID: D7L3Y2  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 67 4 1 2 22 9 19 83 402 463 ]
C [ 6 132 2 47 7 826 957 877 491 167 ]
G [ 907 2 995 949 215 125 7 4 79 278 ]
T [ 20 862 1 2 756 40 17 36 27 92 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1054.1 MA1054 1 ARALYDRAFT_897773 Arabidopsis lyrata subsp. lyrata
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: