Detailed information of matrix profile MA1063.1

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Profile summary
Name: TCP19
Matrix ID: MA1063.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 21241251
Uniprot ID: Q9LT89  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 81 2 1 25 130 118 53 115 206 450 ]
C [ 106 128 0 1 22 409 778 846 506 181 ]
G [ 812 29 999 961 739 283 57 7 151 221 ]
T [ 0 841 0 13 109 190 112 32 137 148 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1063.1 MA1063 1 TCP19 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: