Detailed information of matrix profile MA1200.1

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Profile summary
Name: AGL25
Matrix ID: MA1200.1
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: Q9S7Q7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 124 22 4 0 7 0 0 108 55 85 52 56 46 68 11 120 149 147 ]
C [ 18 147 8 0 0 230 210 14 13 8 12 35 32 0 17 43 20 24 ]
G [ 19 48 0 0 0 0 0 3 10 6 3 22 50 141 154 16 20 27 ]
T [ 69 13 218 230 223 0 20 105 152 131 163 117 102 21 48 51 41 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1200.1 MA1200 1 AGL25 Arabidopsis thaliana
MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: