Detailed information of matrix profile MA1696.1

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Profile summary
Name: ARF39
Matrix ID: MA1696.1
Class: B3 domain
Family:
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 24485461
Uniprot ID:
Source: 30375394
Comment: The motif matches the TGTC core motif associated to ARF TFs.

Sequence logo

Frequency matrix

         
A [ 539 720 514 46 302 2101 3833 58 3856 688 466 629 ]
C [ 2006 576 32 27 46 29 29 3926 106 1832 1030 517 ]
G [ 641 2373 3496 3983 3612 1884 172 62 69 697 2258 669 ]
T [ 882 399 26 12 108 54 34 22 37 851 314 2253 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1696.1 MA1696 1 ARF39 Zea mays
B3 domain
     

log(P-value) = -10535.4

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