Detailed information of matrix profile PB0003.1

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Profile summary
Name: Ascl2_1
Matrix ID: PB0003.1
Class: Zipper-Type
Family: Helix-Loop-Helix
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: O35885  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 33 38 27 7 47 15 1 96 1 5 3 1 8 10 30 42 32 ]
C [ 39 19 16 29 17 9 98 1 12 76 1 1 45 23 12 24 19 ]
G [ 14 21 37 32 24 72 1 1 82 18 1 97 18 20 48 19 33 ]
T [ 15 22 20 32 12 4 1 2 5 1 95 1 29 47 9 15 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0003.1 PB0003 1 Ascl2_1 Mus musculus
Helix-Loop-Helix Zipper-Type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: