Detailed information of matrix profile PH0010.1

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Profile summary
Name: Alx1_1
Matrix ID: PH0010.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q8C8B0  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 31 24 17 29 53 5 1 98 98 1 0 92 53 17 15 7 20 ]
C [ 14 23 12 16 11 40 7 0 0 1 1 0 2 31 14 65 17 ]
G [ 40 29 31 32 21 2 0 1 1 0 0 7 40 9 33 21 44 ]
T [ 15 24 39 23 15 53 92 0 1 98 98 1 5 43 38 7 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0010.1 PH0010 1 Alx1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: