Detailed information of matrix profile PH0035.1

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Profile summary
Name: Gsc
Matrix ID: PH0035.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q02591  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 47 34 40 26 28 7 3 99 99 0 1 0 3 8 22 26 31 ]
C [ 16 22 13 46 11 40 0 0 0 0 97 95 44 36 12 23 31 ]
G [ 13 24 5 10 52 1 0 1 0 1 0 0 40 8 24 12 26 ]
T [ 24 21 43 18 9 52 97 0 0 99 3 4 13 48 42 39 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0035.1 PH0035 1 Gsc Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: