Detailed information of matrix profile PH0044.1

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Profile summary
Name: Homez
Matrix ID: PH0044.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q80W88  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 59 34 50 46 34 87 1 4 1 21 4 16 14 13 52 37 27 ]
C [ 6 17 11 13 42 3 1 95 1 1 2 3 14 23 19 5 17 ]
G [ 17 14 9 3 17 0 1 0 97 2 3 2 12 18 5 29 31 ]
T [ 18 34 30 38 7 9 97 1 1 76 91 79 61 46 23 28 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0044.1 PH0044 1 Homez Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: