Detailed information of matrix profile PL0004.1

  1. Home
  2. Matrix > PL0004.1

Profile summary
Name: hlh-27
Matrix ID: PL0004.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18056  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 27 26 19 10 4 93 0 98 0 7 5 1 4 38 16 ]
C [ 28 14 12 1 0 5 98 0 83 0 65 1 51 30 25 ]
G [ 17 19 61 86 94 0 0 0 0 91 5 94 9 17 14 ]
T [ 26 39 7 0 0 0 0 0 16 0 23 1 33 13 43 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0004.1 PL0004 1 hlh-27 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: