Detailed information of matrix profile PL0018.1

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Profile summary
Name: hlh-25
Matrix ID: PL0018.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18054  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 38 32 13 39 0 21 0 15 0 0 0 0 1 10 31 22 ]
C [ 18 18 17 4 97 1 88 0 0 0 0 94 84 52 23 14 ]
G [ 25 31 48 53 0 75 0 84 0 99 10 0 1 8 16 31 ]
T [ 17 16 20 2 0 2 10 0 98 0 89 4 12 28 28 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0018.1 PL0018 1 hlh-25 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: