MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA1102.1 CTCFL letter-probability matrix: alength= 4 w= 14 nsites= 8825 E= 0 0.071048 0.783569 0.097450 0.047932 0.378924 0.168499 0.285552 0.167025 0.103003 0.526912 0.328385 0.041700 0.056544 0.759547 0.060623 0.123286 0.954334 0.018810 0.017224 0.009632 0.008612 0.010538 0.974051 0.006799 0.064363 0.016431 0.910482 0.008725 0.030142 0.036827 0.874334 0.058697 0.013938 0.020283 0.957167 0.008612 0.014391 0.015411 0.949575 0.020623 0.013258 0.977337 0.004193 0.005212 0.455751 0.082720 0.419490 0.042040 0.080907 0.427422 0.390708 0.100963 0.150595 0.384363 0.205099 0.259943 URL http://jaspar.genereg.net/matrix/MA1102.1 MOTIF MA1102.2 CTCFL letter-probability matrix: alength= 4 w= 12 nsites= 18037 E= 0 0.322947 0.231746 0.268559 0.176748 0.147419 0.389921 0.393303 0.069357 0.072130 0.713367 0.112713 0.101791 0.957476 0.022897 0.018240 0.001386 0.004768 0.026667 0.958308 0.010257 0.037922 0.033265 0.915396 0.013417 0.019349 0.063259 0.855187 0.062205 0.010700 0.042524 0.932472 0.014304 0.019460 0.014969 0.942563 0.023008 0.010035 0.975384 0.003770 0.010811 0.230970 0.167156 0.515551 0.086323 0.098187 0.428397 0.351555 0.121861 URL http://jaspar.genereg.net/matrix/MA1102.2 MOTIF PF0171.1 CTCNANGTGNY letter-probability matrix: alength= 4 w= 11 nsites= 368 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.116848 0.728261 0.054348 0.100543 1.000000 0.000000 0.000000 0.000000 0.187500 0.339674 0.320652 0.152174 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.203804 0.312500 0.301630 0.182065 0.000000 0.684783 0.000000 0.315217 URL http://jaspar.genereg.net/matrix/PF0171.1 MOTIF PF0101.1 CTGCAGY letter-probability matrix: alength= 4 w= 7 nsites= 4132 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.664811 0.000000 0.335189 URL http://jaspar.genereg.net/matrix/PF0101.1 MOTIF PF0153.1 CTGRYYYNATT letter-probability matrix: alength= 4 w= 11 nsites= 184 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.619565 0.000000 0.380435 0.000000 0.000000 0.510870 0.000000 0.489130 0.000000 0.581522 0.000000 0.418478 0.000000 0.260870 0.000000 0.739130 0.244565 0.364130 0.190217 0.201087 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 URL http://jaspar.genereg.net/matrix/PF0153.1 MOTIF PF0082.1 CTGYNNCTYTAA letter-probability matrix: alength= 4 w= 12 nsites= 364 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.445055 0.000000 0.554945 0.195055 0.497253 0.170330 0.137363 0.060440 0.478022 0.145604 0.315934 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.032967 0.000000 0.967033 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 URL http://jaspar.genereg.net/matrix/PF0082.1 MOTIF PF0029.1 CTTTAAR letter-probability matrix: alength= 4 w= 7 nsites= 3588 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.555463 0.000000 0.444537 0.000000 URL http://jaspar.genereg.net/matrix/PF0029.1 MOTIF PF0073.1 CTTTGA letter-probability matrix: alength= 4 w= 6 nsites= 4260 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 URL http://jaspar.genereg.net/matrix/PF0073.1 MOTIF PF0013.1 CTTTGT letter-probability matrix: alength= 4 w= 6 nsites= 9424 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 URL http://jaspar.genereg.net/matrix/PF0013.1 MOTIF MA0287.1 CUP2 letter-probability matrix: alength= 4 w= 11 nsites= 9 E= 0 0.000000 0.777778 0.000000 0.222222 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.222222 0.777778 0.000000 0.000000 0.666667 0.000000 0.333333 0.000000 0.444444 0.111111 0.444444 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.777778 0.000000 0.222222 0.000000 0.444444 0.000000 0.000000 0.555556 0.222222 0.000000 0.777778 0.000000 URL http://jaspar.genereg.net/matrix/MA0287.1