Detailed information of matrix profile MA0161.2

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Profile summary
Name: NFIC
Matrix ID: MA0161.2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12101405
Uniprot ID: P08651  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 2791 2844 574 530 290 81 10745 10781 324 3488 3867 ]
C [ 2760 3186 478 88 10973 11087 177 369 329 2086 2478 ]
G [ 2712 2951 397 10725 121 129 333 303 10542 2137 2647 ]
T [ 3344 2626 10158 264 223 310 352 154 412 3896 2615 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0161.1 MA0161 1 NFIC Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
MA0161.2 MA0161 2 NFIC Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
     

log(P-value) = -2055.67

TFFM details

TFFM ID: TFFM0072.2

ChIP-seq Centrality
log(P-value): -6247.73

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0072.2

ChIP-seq Centrality
log(P-value): -6323.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: