Detailed information of matrix profile MA0216.2

  1. Home
  2. Matrix > MA0216.2

Profile summary
Name: cad
Matrix ID: MA0216.2
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-chip
Validation: 2571934
Uniprot ID: P09085  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 502 404 0 0 67 2208 0 83 822 0 306 ]
C [ 0 147 0 0 0 0 186 0 0 1387 1143 ]
G [ 755 115 0 0 0 95 0 1475 1481 341 0 ]
T [ 1046 1637 2303 2303 2236 0 2117 745 0 575 854 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0216.1 MA0216 1 cad Drosophila melanogaster
HOX-related factors Homeo domain factors
MA0216.2 MA0216 2 cad Drosophila melanogaster
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0159.1

ChIP-seq Centrality
log(P-value):

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0159.1

ChIP-seq Centrality
log(P-value):

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: