Detailed information of matrix profile PB0005.1

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Profile summary
Name: Bbx_1
Matrix ID: PB0005.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8VBW5  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 26 46 24 13 9 14 92 34 4 5 87 78 18 18 44 ]
C [ 35 12 35 3 2 75 3 12 2 6 2 5 22 6 12 ]
G [ 6 13 28 5 2 6 2 8 3 75 2 3 14 16 19 ]
T [ 33 29 12 78 87 5 4 45 92 14 9 13 46 61 24 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0005.1 PB0005 1 Bbx_1 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: