Detailed information of matrix profile PB0029.1

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Profile summary
Name: Hic1_1
Matrix ID: PB0029.1
Class: Zinc-coordinating
Family: BetaBetaAlpha-zinc finger
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9R1Y5  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 28 24 15 44 12 4 9 1 0 0 0 99 2 34 32 26 ]
C [ 14 15 29 17 5 3 12 0 0 2 96 0 32 27 22 25 ]
G [ 33 41 15 19 80 93 21 7 99 97 0 0 1 24 33 21 ]
T [ 24 20 40 20 3 1 58 92 0 0 4 0 66 15 14 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0029.1 PB0029 1 Hic1_1 Mus musculus
BetaBetaAlpha-zinc finger Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: