Detailed information of matrix profile PB0059.1

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Profile summary
Name: Six6_1
Matrix ID: PB0059.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q9QZ28  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 43 26 48 30 34 2 2 99 0 95 0 3 3 14 40 32 23 ]
C [ 17 17 14 18 8 3 0 0 3 5 84 92 82 34 18 11 29 ]
G [ 21 22 14 17 32 1 97 0 0 0 1 2 3 15 6 17 16 ]
T [ 18 35 24 35 26 94 1 0 97 0 15 2 12 38 36 40 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0059.1 PB0059 1 Six6_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: