Detailed information of matrix profile PH0033.1

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Profile summary
Name: Gbx1
Matrix ID: PH0033.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P82976  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 39 36 22 51 18 1 97 99 0 0 71 5 11 17 19 27 32 ]
C [ 6 29 52 20 71 28 2 0 1 0 0 5 18 21 29 31 19 ]
G [ 8 27 17 16 5 0 0 1 0 2 28 71 12 37 37 12 22 ]
T [ 47 9 10 14 5 71 0 0 99 97 1 18 59 25 14 30 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0033.1 PH0033 1 Gbx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: