Detailed information of matrix profile PH0037.1

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Profile summary
Name: Hdx
Matrix ID: PH0037.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q14B70  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 18 26 26 24 45 8 3 93 5 10 2 4 24 33 35 22 27 ]
C [ 19 6 31 20 16 1 4 3 3 6 5 72 16 35 52 26 21 ]
G [ 23 35 30 33 22 4 90 2 1 1 23 2 31 12 9 18 20 ]
T [ 40 34 14 23 18 86 3 2 92 83 70 21 30 20 5 34 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0037.1 PH0037 1 Hdx Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: