Detailed information of matrix profile PH0050.1

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Profile summary
Name: Hoxa3
Matrix ID: PH0050.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P02831  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 47 3 1 94 99 0 0 88 28 7 16 12 35 50 ]
C [ 12 46 2 5 0 0 0 0 34 53 15 50 19 21 ]
G [ 35 16 0 0 0 1 10 11 30 10 30 19 29 11 ]
T [ 5 35 97 0 0 99 90 0 7 30 39 19 16 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0050.1 PH0050 1 Hoxa3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: