Detailed information of matrix profile PH0084.1

  1. Home
  2. Matrix > PH0084.1

Profile summary
Name: Irx3_2
Matrix ID: PH0084.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P81067  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 40 38 27 28 22 95 1 95 4 2 2 74 45 27 41 18 36 ]
C [ 11 13 15 24 1 1 97 0 1 0 1 3 20 9 11 27 13 ]
G [ 16 24 26 24 3 1 0 1 0 97 1 1 20 16 15 16 16 ]
T [ 33 25 32 25 74 2 2 4 95 1 95 22 15 49 32 39 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0084.1 PH0084 1 Irx3_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: