Detailed information of matrix profile PH0087.1

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Profile summary
Name: Irx6
Matrix ID: PH0087.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9ER75  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 36 54 40 31 20 95 1 95 3 3 3 76 37 40 48 32 13 ]
C [ 18 13 16 16 1 1 96 0 2 1 1 3 27 10 11 22 6 ]
G [ 12 12 12 28 3 1 1 2 0 96 1 1 18 21 11 21 7 ]
T [ 34 21 32 24 76 3 3 3 95 1 95 20 18 28 30 25 74 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0087.1 PH0087 1 Irx6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: