Detailed information of matrix profile PL0001.1

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Profile summary
Name: hlh-11
Matrix ID: PL0001.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: P34474  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 28 13 44 24 4 89 1 3 2 1 70 2 20 30 31 34 ]
C [ 34 26 20 12 93 1 5 90 1 1 1 16 40 19 12 18 ]
G [ 16 41 20 2 1 6 88 4 1 94 7 7 14 27 31 15 ]
T [ 21 18 14 60 1 2 4 1 94 2 20 73 24 22 25 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0001.1 PL0001 1 hlh-11 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: