Detailed information of matrix profile PL0009.1

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Profile summary
Name: hlh-26
Matrix ID: PL0009.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18053  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 39 20 31 25 23 75 1 94 0 1 4 2 0 20 30 21 29 ]
C [ 20 21 17 17 3 2 97 0 95 0 11 0 55 53 19 22 24 ]
G [ 9 22 18 31 67 19 0 3 0 97 1 95 1 7 20 14 23 ]
T [ 30 34 32 24 5 1 0 1 2 0 82 0 42 18 29 41 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0009.1 PL0009 1 hlh-26 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: