Detailed information of matrix profile MA0147.2

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Profile summary
Name: Myc
Matrix ID: MA0147.2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: P01108  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 1181 0 5335 0 0 0 0 49 848 82 ]
C [ 3650 5335 0 2295 0 0 0 2297 1087 1877 ]
G [ 504 0 0 0 5335 0 5335 2081 556 801 ]
T [ 0 0 0 3040 0 5335 0 908 2844 2575 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0147.1 MA0147 1 Myc Mus musculus
bHLH-ZIP factors Basic helix-loop-helix factors (bHLH)
MA0147.2 MA0147 2 Myc Mus musculus
bHLH-ZIP factors Basic helix-loop-helix factors (bHLH)
MA0147.3 MA0147 3 MYC Homo sapiens
bHLH-ZIP factors Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -3777

TFFM details

TFFM ID: TFFM0066.1

ChIP-seq Centrality
log(P-value): -7883.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0066.1

ChIP-seq Centrality
log(P-value): -8056.8

TFFM detailed summary logos

Description: v-myc avian myelocytomatosis viral oncogene homolog

Alias: c-Myc,bHLHe39,MYCC

Symbol: MYC

Consensus:

Included Models:

GC Content: