Detailed information of matrix profile MA0626.1

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Profile summary
Name: Npas2
Matrix ID: MA0626.1
Class: Basic helix-loop-helix factors (bHLH)
Family: PAS domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: PBM
Validation: 23332764
Uniprot ID: P97460  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 202 566 0 999 0 0 0 0 48 257 ]
C [ 202 188 918 0 918 0 0 0 420 293 ]
G [ 299 172 0 0 0 918 0 999 377 177 ]
T [ 297 74 81 0 81 81 999 0 154 273 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0626.1 MA0626 1 Npas2 Mus musculus
PAS domain factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: