Detailed information of matrix profile MA0654.1

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Profile summary
Name: ISX
Matrix ID: MA0654.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: Q2M1V0  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 318 10 2065 2065 0 0 2065 770 ]
C [ 863 1003 48 16 0 0 0 307 ]
G [ 364 0 5 0 0 24 0 704 ]
T [ 520 1061 24 10 2065 2065 49 283 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0654.1 MA0654 1 ISX Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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