Detailed information of matrix profile MA0836.1

  1. Home
  2. Matrix > MA0836.1

Profile summary
Name: CEBPD
Matrix ID: MA0836.1
Class: Basic leucine zipper factors (bZIP)
Family: C/EBP-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8632009
Uniprot ID: P49716  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 3674 0 1 3395 88 814 832 7063 7063 54 ]
C [ 1257 0 1 5 7063 84 7063 139 0 3001 ]
G [ 1910 2 753 3668 34 7063 3 0 0 220 ]
T [ 222 7063 7063 702 613 74 724 5 0 4062 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0836.1 MA0836 1 CEBPD Homo sapiens
C/EBP-related factors Basic leucine zipper factors (bZIP)
MA0836.2 MA0836 2 CEBPD Homo sapiens
C/EBP-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0011.1

ChIP-seq Centrality
log(P-value): -2612.01

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0011.1

ChIP-seq Centrality
log(P-value): -2604.06

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: