Detailed information of matrix profile MA0976.2

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Profile summary
Name: CRF4
Matrix ID: MA0976.2
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9SUE3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 363 369 134 131 25 87 51 9 9 63 163 321 ]
C [ 757 198 40 653 16 9 1734 15 22 1744 111 247 ]
G [ 168 1002 1659 12 1804 1794 2 1866 1865 4 1377 1167 ]
T [ 612 331 67 1104 55 10 113 10 4 89 249 165 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0976.1 MA0976 1 CRF4 Arabidopsis thaliana
AP2/ERF domain
MA0976.2 MA0976 2 CRF4 Arabidopsis thaliana
AP2/ERF domain
     

log(P-value) = -1023.54

TFFM details

TFFM ID: TFFM0460.2

ChIP-seq Centrality
log(P-value): -495.791

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0460.2

ChIP-seq Centrality
log(P-value): -466.895

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: