Detailed information of matrix profile MA1062.2

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Profile summary
Name: TCP15
Matrix ID: MA1062.2
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID: Q9C9L2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 275 255 366 287 100 11 82 2 27 241 12 1 10 765 25 242 206 232 235 ]
C [ 140 170 116 137 46 48 5 1 4 135 788 823 736 10 660 158 128 159 171 ]
G [ 175 156 133 157 654 6 732 821 785 134 3 1 4 41 43 141 127 182 141 ]
T [ 237 246 212 246 27 762 8 3 11 317 24 2 77 11 99 286 366 254 280 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1062.1 MA1062 1 TCP15 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
MA1062.2 MA1062 2 TCP15 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     

log(P-value) = -440.318

TFFM details

TFFM ID: TFFM0242.2

ChIP-seq Centrality
log(P-value): -1094.93

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0242.2

ChIP-seq Centrality
log(P-value): -1087.55

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: