Detailed information of matrix profile MA1170.1

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Profile summary
Name: MYB118
Matrix ID: MA1170.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LVW4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 135 129 117 107 51 164 146 78 6 0 0 1 278 2 145 123 138 ]
C [ 34 35 33 34 80 7 0 178 251 0 0 0 0 270 5 24 22 ]
G [ 40 34 32 51 29 84 57 22 19 278 0 0 0 0 78 23 18 ]
T [ 69 80 96 86 118 23 75 0 2 0 278 277 0 6 50 108 100 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1170.1 MA1170 1 MYB118 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0528.1

ChIP-seq Centrality
log(P-value): -5482.68

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0528.1

ChIP-seq Centrality
log(P-value): -5554.35

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: