Detailed information of matrix profile MA1173.1

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Profile summary
Name: MYB101
Matrix ID: MA1173.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: O80883  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 212 260 119 163 0 73 0 0 1 342 112 155 106 108 105 ]
C [ 68 22 2 27 510 49 0 2 1 47 188 44 47 70 86 ]
G [ 181 112 72 43 4 424 600 0 2 51 120 261 249 53 82 ]
T [ 139 206 407 367 86 54 0 598 596 160 180 140 198 369 327 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1173.1 MA1173 1 MYB101 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0358.1

ChIP-seq Centrality
log(P-value): -251.914

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0358.1

ChIP-seq Centrality
log(P-value): -222.994

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: