Detailed information of matrix profile MA1209.1

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Profile summary
Name: ATHB20
Matrix ID: MA1209.1
Class: Homeo domain factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q8LAT0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 58 30 230 230 0 218 230 0 0 71 131 ]
C [ 59 115 0 0 0 0 0 0 1 19 27 ]
G [ 23 2 0 0 0 9 0 0 0 110 31 ]
T [ 90 83 0 0 230 3 0 230 229 30 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1209.1 MA1209 1 ATHB20 Arabidopsis thaliana
Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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