Detailed information of matrix profile MA1228.1

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Profile summary
Name: AT4G18450
Matrix ID: MA1228.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q8LBQ7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 187 78 0 34 0 0 0 13 6 85 179 91 128 124 104 101 127 ]
C [ 52 289 0 0 526 0 0 505 7 69 205 25 48 221 50 68 182 ]
G [ 263 0 534 503 0 537 537 0 472 378 32 337 288 72 299 290 83 ]
T [ 35 170 3 0 11 0 0 19 52 5 121 84 73 120 84 78 145 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1228.1 MA1228 1 AT4G18450 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0265.1

ChIP-seq Centrality
log(P-value): -196.246

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0265.1

ChIP-seq Centrality
log(P-value): -212.825

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: